Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
PCPG rs35094159 chr17:50313435 A/C 6.48E-5 177 25.4 28.47 14.47 KM Plot
PCPG rs35111295 chr20:55378439 A/AT 5.23E-5 173 24.77 27.23 18.2 KM Plot
PCPG rs35113650 chr14:74511124 C/G 0.000221 175 25.4 27.43 10.43 KM Plot
PCPG rs35131670 chr16:90058157 T/G 1.09E-8 172 25.77 20.28 6.62 KM Plot
PCPG rs35157967 chr12:56730427 T/TA 9.68E-8 178 25.17 29.13 0.8 KM Plot
PCPG rs35161336 chr9:136943176 G/GTA 2.11E-5 177 25.53 19.43 28.57 KM Plot
PCPG rs35163227 chr3:53127876 A/G 6.98E-6 177 25.4 26.05 11.78 KM Plot
PCPG rs35174175 chr3:53041509 T/C 6.09E-6 177 25.28 26.57 11.78 KM Plot
PCPG rs35198825 chr14:74488106 T/C 3.72E-7 178 25.28 28.38 7.4 KM Plot
PCPG rs35202249 chr15:43148042 C/T 2.03E-14 177 25.87 24.7 3.17 KM Plot
PCPG rs35215387 chr12:31784215 AC/A 0.000296 178 24.5 28.3 16.83 KM Plot
PCPG rs35225829 chr14:74443498 G/A 0.00011 178 25.08 30.33 10.3 KM Plot
PCPG rs35225887 chr8:41301370 G/A 4.46E-5 175 25.08 26.57 10.43 KM Plot
PCPG rs35227177 chr14:74524193 G/C 0.000221 175 25.4 27.43 10.43 KM Plot
PCPG rs35243737 chr14:74341754 G/A 9.6E-6 178 25.47 28.3 10.3 KM Plot